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    赵婷婷, 陈倩, 夏志林, 王军, 喻奇伟, 王磊, 聂琼, 刘洋, 刘仁祥. Cams1基因在烟草上的同源克隆及生物信息学分析[J]. 中国烟草科学, 2020, 41(2): 72-78. DOI: 10.13496/j.issn.1007-5119.2020.02.013
    引用本文: 赵婷婷, 陈倩, 夏志林, 王军, 喻奇伟, 王磊, 聂琼, 刘洋, 刘仁祥. Cams1基因在烟草上的同源克隆及生物信息学分析[J]. 中国烟草科学, 2020, 41(2): 72-78. DOI: 10.13496/j.issn.1007-5119.2020.02.013
    ZHAO Tingting, CHEN Qian, XIA Zhilin, WANG Jun, YU Qiwei, WANG Lei, NIE Qiong, LIU Yang, LIU Renxiang. Homologous Cloning and Bioinformatics Analysis of Gene Cams1 in Tobacco[J]. CHINESE TOBACCO SCIENCE, 2020, 41(2): 72-78. DOI: 10.13496/j.issn.1007-5119.2020.02.013
    Citation: ZHAO Tingting, CHEN Qian, XIA Zhilin, WANG Jun, YU Qiwei, WANG Lei, NIE Qiong, LIU Yang, LIU Renxiang. Homologous Cloning and Bioinformatics Analysis of Gene Cams1 in Tobacco[J]. CHINESE TOBACCO SCIENCE, 2020, 41(2): 72-78. DOI: 10.13496/j.issn.1007-5119.2020.02.013

    Cams1基因在烟草上的同源克隆及生物信息学分析

    Homologous Cloning and Bioinformatics Analysis of Gene Cams1 in Tobacco

    • 摘要: 为拓宽烟草不育基因的来源,依据辣椒雄性不育基因Cams1序列,在烟草品种K326中同源克隆获得基因Ntms1,采用生物信息学方法对辣椒Cams1基因和烟草Ntms1基因的核苷酸序列、蛋白质结构、亲疏水性及结构域等进行分析,并利用CRISPR/Cas9技术对Ntms1基因功能进行了验证。结果表明,Cams1基因和Ntms1基因的蛋白质序列相似度为85.25%,基因编码产物具有相同的PHD功能结构域,都具有磷酸化识别位点,有相似的二级和三级蛋白质结构,且两个基因都没有信号肽和跨膜区的结构,推测烟草Ntms1基因与辣椒不育基因Cams1具有相似的控制育性功能。遗传转化结果表明,突变株的Ntms1基因表达量和有活力花粉量极显著低于野生型植株,证明了烟草Ntms1基因具有控制烟草花粉育性功能。

       

      Abstract: To broaden the source of tobacco sterility genes, based on the capsicum male sterility gene Cams1 sequence, the gene Ntms1 was homologously cloned in tobacco variety K326. Bioinformatics method was employed to analyze the nucleotide sequence, protein structure, hydrophilicity and domain of Capsicum gene Cams1 and tobacco gene Ntms1, and the function of Ntms1 was verified by using CRISPR/Cas9 technique. Results showed that the protein sequence similarity of Cams1 and Ntms1 reached 85.25%, with the products encoded by the two genes having same PHD functional domain, same phosphorylation recognition site, similar secondary and tertiary protein structures, and the two genes had no signal peptide and transmembrane structure. It was speculated that tobacco Ntms1 gene and pepper sterile gene Cams1 had similar function of fertility control. The results of genetic transformation showed that the expression of Ntms1 and the amount of active pollen in the mutant were highly significantly lower than that in the wild type, which proved that Ntms1 had the function of tobacco pollen fertility control.

       

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